Orain
The AI workbench for spatial multi-omics. Open whole-slide images, outline every cell, find tissue patterns across patient cohorts, and get a reviewed report, all from Claude.
- Brand
- Orain
- Category
- Data & Analytics
- Primary Subcategory
- Scientific & Biomedical Research Data
Integration details
Description
Orain stores your tissue data (H&E and IHC whole-slide images, multiplex imaging such as CODEX/PhenoCycler, IMC and mIF, and spatial transcriptomics such as Visium, Xenium and CosMx) and runs the pipelines on its own GPUs, so Claude never has to move a multi-gigabyte slide. From a conversation you can: - Bring data in: upload a file, ingest any public URL, or pull open-access TCGA/CPTAC slides from NCI GDC. - Open a slide in an interactive viewer and get a link to it. - Outline every nucleus, measure tissue versus airspace, and name each tissue piece or TMA core. - Compute patch embeddings and discover spatial tissue patterns that separate two groups of patients, such as responders versus non-responders or KRAS versus STK11. - Ask an analysis question. Orain's own analyst works in your project and returns an answer and a written, reviewed report. - Share a read-only link that a collaborator can open without logging in. Every result has a page in Orain where you can see it on the slide. You need an Orain account. Storage, rented compute and analyst questions are charged at cost from your workspace credit, and new workspaces start with free credit.
- Integration type
- Connector
- Verification status
Community connector- Platform
- Claude
- Primary Subcategory
- Scientific & Biomedical Research Data
- Secondary Subcategories
- None listed
- Brand
- Orain
- Access
- Account required
- First tracked
- 2026-10-04
- Tool count
- 30
- Geography
- US
The Primary Subcategory used for this profile’s headline score.
Other Subcategories where the Integration is listed.
Claude Connector discovery is coming soon
Community Connectors only appear in Claude’s registry.Once verified, organic discovery begins and we can calculate your score.Read more about Community Connector verification.
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What discovery looks like

Claude can surface verified Connectors when they match a user’s Prompt.
How Claude Connector discovery works
Your Connector will compete to appear for users’ Prompts once Claude verifies it
Competing in Claude Scientific & Biomedical Research Data
View Category30 tools agents can invoke
Orain Claude Connector FAQ
How the directory, categories and Discoverability Score work.
Read the methodologyHow do I improve Orain's Claude Connector discoverability?
The levers are the listing surface agents actually read: names, descriptions, keywords, tool metadata, and registry health. Which lever matters depends on where discovery breaks, which is what continuous measurement shows.
What are Orain alternatives on Claude?
As of 2026-10-05, Orain competes with Amass Connector, Synthesize Bio, Helix GenoSphere, Synapse.org, LatchBio, Benchling, ChEMBL, Clinical Trials and 17 more in Claude Scientific & Biomedical Research Data, ranked by public Discoverability Score.
Where is this profile measured?
This profile uses the geography attached to the latest public registry snapshot: US. Locale tags are intentionally omitted.